rs12540602 chr7:34134444 G>A
- Sequence
tgagaccatcttgcaagatttgcc[G/A]ggctctgctaggatggggcccaaa
- ASB in cell types
- A549 (lung carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.03 | 1.28 | 1.83 | n/a | n/a | |||
| SMC3_HUMAN | -0.04 | 0.99 | 2.00 | n/a | n/a |
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