rs12546639 chr8:144950771 C>G
- Sequence
cagggacaaccagacgcagggtcc[C/G]aggcgtggagcttcgcggaactaa
- ASB in cell types
- K562 (myelogenous leukemia) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZEB2_HUMAN MNT_HUMAN EGR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZEB2_HUMAN | -1.04 | 1.42 | 1.78 | n/a | n/a | |||
| MNT_HUMAN | -0.36 | 1.68 | 2.00 | n/a | n/a | |||
| EGR1_HUMAN | -0.47 | 1.60 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood