rs12547431 chr8:124854701 T>C
- Sequence
tggtaggtcctggagtttcggaga[T/C]gcaataacatgaccatggtgtgca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.53 | 0.60 | 1.62 | n/a | No Hit | |||
| ESR1_HUMAN | 1.11 | -0.05 | 1.90 | n/a | No Hit | |||
| GATA3_HUMAN | 1.85 | -2.01 | 1.67 | n/a | No Hit |
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