rs12549236 chr8:128117529 G>T
- Sequence
tatttttttcccagaattattctc[G/T]ctgtgcagagggaatcacagttaa
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- EP300_HUMAN GCR_HUMAN JUN_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | -1.21 | 1.80 | 1.81 | n/a | n/a | |||
| GCR_HUMAN | -1.20 | 1.71 | 1.88 | n/a | No Hit | |||
| JUN_HUMAN | -0.89 | 1.04 | 1.50 | n/a | No Hit | |||
| SMC3_HUMAN | -0.55 | 1.14 | 1.12 | n/a | n/a |
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