rs12549794 chr8:130202001 T>C
- Sequence
ggcttaccacgtactagggtgaca[T/C]agtaatgtctcatagtagacatta
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZN382_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN382_HUMAN | 2.75 | -3.41 | 1.33 | -3.88 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adrenal_Gland, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Thyroid, Whole_Blood