rs12562182 chr1:85276285 G>C
- Sequence
cccccgcccgccctgggcacagct[G/C]cgttactcacgtccttcttcactt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EGR1_HUMAN HDAC1_HUMAN NR2C2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | 1.75 | -0.45 | 1.83 | n/a | No Hit | |||
| HDAC1_HUMAN | 1.80 | -0.18 | 2.00 | n/a | n/a | |||
| NR2C2_HUMAN | 1.89 | -1.62 | 1.33 | n/a | No Hit |
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