rs12564092 chr1:61353524 G>C
- Sequence
gaatggtacagaacgatctttaat[G/C]tttgtgtactttgcagaaaaatgt
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.76 | 1.76 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 0.31 | 0.92 | 2.00 | -3.26 | Discordant |
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Motif analysis
