rs12573280 chr10:6445812 C>A
- Sequence
aggaaatataagatgcacctaata[C/A]aatctttgctcaatttgctgggcc
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) foreskin keratinocyte erythroid progenitors
- ASB for transcription factors
- SMC3_HUMAN CTCF_HUMAN KDM1A_HUMAN MNT_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.26 | 1.07 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.63 | 0.78 | 1.57 | n/a | No Hit | |||
| KDM1A_HUMAN | -1.04 | 1.86 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -1.16 | 1.27 | 2.00 | n/a | n/a |
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