rs12588393 chr14:104137798 G>A
- Sequence
atttggggcccggctaggcacaga[G/A]caactggtcgccagggaagggcgg
- ASB in cell types
- A549 (lung carcinoma) HEK293 (embryonic kidney) MDA-MB-453 (breast adenocarcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.37 | -0.01 | 1.84 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Coronary, Colon_Transverse, Heart_Left_Ventricle, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Whole_Blood