rs12591791 chr15:50134767 T>A
- Sequence
cagaaggggaaggaagaggtaaaa[T/A]gtcaaagatgatgtcacattcttt
- ASB in cell types
- K562 (myelogenous leukemia) periferal blood macrophages
- ASB for transcription factors
- ATF3_HUMAN KDM1A_HUMAN HDAC1_HUMAN MTG16_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | 2.66 | n/a | 2.00 | n/a | No Hit | |||
| KDM1A_HUMAN | 2.10 | -0.49 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | 1.63 | -0.50 | 2.00 | n/a | n/a | |||
| MTG16_HUMAN | 1.92 | -1.77 | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.79 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood