rs12593593 chr15:55897394 A>G
- Sequence
ctaggacgtggagggaattttcca[A/G]gaaggaaataggaatagttctagc
- ASB in cell types
- A549 (lung carcinoma) upper lobe of left lung SUM159PT (pleiomorphic breast carcinoma)
- ASB for transcription factors
- JUN_HUMAN GCR_HUMAN EP300_HUMAN MAFK_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.81 | -1.13 | 1.20 | n/a | No Hit | |||
| GCR_HUMAN | 2.38 | -0.91 | 1.39 | n/a | No Hit | |||
| EP300_HUMAN | 2.42 | 2.43 | 1.50 | n/a | n/a | |||
| MAFK_HUMAN | 1.30 | n/a | 1.33 | n/a | No Hit | |||
| CEBPB_HUMAN | 1.24 | -0.37 | 1.37 | n/a | No Hit |
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