rs12596594 chr16:58266008 G>A
- Sequence
cctgccccatctccccggccccac[G/A]tctgaccccatcagtgtggtctca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ZN592_HUMAN NR2C1_HUMAN ZNF24_HUMAN ID3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN592_HUMAN | 2.51 | n/a | 2.00 | n/a | n/a | |||
| NR2C1_HUMAN | 2.28 | -3.32 | 2.00 | n/a | No Hit | |||
| ZNF24_HUMAN | 1.50 | 0.40 | 2.17 | n/a | n/a | |||
| ID3_HUMAN | 2.42 | -3.38 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Frontal_Cortex_BA9, Nerve_Tibial, Testis