rs12597428 chr16:56871546 T>G
- Sequence
ctgacctgcagctgtcagagggtg[T/G]cctccttgctcttccttggatgcc
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.25 | 1.14 | 1.58 | 1.54 | Weak Concordant |
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Motif analysis
