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rs126013 chr1:28893758 A>C

Sequence
tgtgctgtgtgtctcactgctgtc[A/C]tttgcttccatgtgccactgcggt
ASB in cell types
K562 (myelogenous leukemia) cranial neural crest cells
ASB for transcription factors
COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN -0.39 1.67 1.000.04 1.67 2.91 Concordant
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Motif analysis

COT1_HUMAN Concordant
COT1_HUMAN pic

Genetic associations

GRASP adiponectin levels hypertension (early onset hypertension) waist hip ratio
GTEx eQTL Adipose_Subcutaneous Brain_Cerebellar_Hemisphere Brain_Cerebellum Cells_Cultured_fibroblasts Skin_Sun_Exposed_Lower_leg Testis

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