rs12601954 chr17:10614785 T>C
- Sequence
tgcacctgggtttaaaaggactgg[T/C]gtgggagctccttttcctcaccac
- ASB in cell types
- foreskin keratinocyte lymphoblastoid cells H1 (embryonic stem cells) HCPEpiC (choroid plexus epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.44 | 0.51 | 1.56 | n/a | No Hit | |||
| RAD21_HUMAN | 1.93 | -1.43 | 1.44 | n/a | n/a |
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