rs12602533 chr17:38932114 A>G
- Sequence
aacaaaacaaaaaacaaacaccgt[A/G]agaggccgggcactgtgcttcacg
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | -3.12 | 2.29 | 2.00 | n/a | No Hit | |||
| CEBPA_HUMAN | n/a | 1.76 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Heart_Atrial_Appendage, Skin_Not_Sun_Exposed_Suprapubic, Whole_Blood