Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs12602593 chr17:80103080 G>T

Sequence
gcccacggtggaacaccacgtccg[G/T]ccgggggcagagcgttcccagcca
ASB in cell types
breast tumor tissue SK-BR-3 (breast adenocarcinoma)
ASB for transcription factors
ESR1_HUMAN ERR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 1.48 0.21 0.030.71 2.25 n/a No Hit
ERR1_HUMAN 1.42 -1.08 0.041.00 2.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis

Download