rs12609822 chr19:41646867 A>T
- Sequence
ttattttattttattttattttat[A/T]tattgttagttcaatagtttttgg
- ASB in cell types
- foreskin keratinocyte A549 (lung carcinoma) MCF10A (breast epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.97 | 1.71 | 1.56 | n/a | No Hit |
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