rs12616815 chr2:64751667 A>C
- Sequence
gtgcaggcggcggctgctgctcag[A/C]ctctgcctggcgctgccggggagc
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma)
- ASB for transcription factors
- NRF1_HUMAN MTG16_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 0.48 | n/a | 2.00 | -0.52 | Weak Concordant | |||
| MTG16_HUMAN | -3.03 | 2.36 | 2.00 | n/a | n/a |
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Motif analysis
