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rs12619684 chr2:170435603 A>G

Sequence
ttcagttctcaggtctactgcgat[A/G]taacttaatcttgtaacagatgaa
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN IKZF2_HUMAN SKIL_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.96 1.77 1.001.7·10-4 1.33 n/a No Hit
IKZF2_HUMAN -1.85 1.63 1.001.0·10-3 1.42 n/a n/a
SKIL_HUMAN n/a 2.05 1.004.1·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial

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