rs12623363 chr2:64751572 G>A
- Sequence
cgctgctggctgcgtgacagcgat[G/A]gggactggctgtgctgcctactct
- ASB in cell types
- K562 (myelogenous leukemia) neutrophils VCaP (prostate carcinoma) fetal bone marrow-derived mononuclear cells
- ASB for transcription factors
- NRF1_HUMAN MTG16_HUMAN TAL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 0.72 | -0.09 | 1.86 | n/a | No Hit | |||
| MTG16_HUMAN | n/a | 2.72 | 2.00 | n/a | n/a | |||
| TAL1_HUMAN | -2.94 | 2.23 | 2.00 | 4.25 | Concordant |
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Motif analysis
