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rs12650570 chr4:80507323 G>A

Sequence
gtgataagaacattctatgggggc[G/A]tcacatggtcttactactccatct
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
TAL1_HUMAN MTG16_HUMAN ARI1B_HUMAN NCOR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TAL1_HUMAN 2.59 -2.32 1.0·10-91.00 2.00 n/a No Hit
MTG16_HUMAN 1.15 n/a 3.1·10-91.00 3.00 n/a n/a
ARI1B_HUMAN 3.00 n/a 4.5·10-91.00 2.00 n/a n/a
NCOR1_HUMAN 2.66 -2.11 8.5·10-61.00 2.00 n/a n/a
HTF4_HUMAN 1.53 -3.20 4.1·10-51.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd rheumatoid arthritis

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