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rs12656602 chr5:109476538 G>C

Sequence
tggaaacggtacaaaccagcattt[G/C]agtgaatgaacactgaaaatgcat
ASB in cell types
upper lobe of left lung
ASB for transcription factors
EP300_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EP300_HUMAN n/a 2.02 1.000.02 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd hdl cholesterol obesity with early age of onset (age >2)
GTEx eQTL Adipose_Visceral_Omentum Lung Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Whole_Blood

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