rs12659181 chr5:149837919 G>A
- Sequence
cgaatccgctgcaggatttgttgc[G/A]cctccactggccggcccacacccg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN KDM5B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.24 | -0.14 | 1.80 | -0.11 | Weak Concordant | |||
| KDM5B_HUMAN | 1.57 | -1.00 | 3.00 | n/a | n/a |
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Motif analysis
Genetic associations
GRASP adiponectin levels, aortic valve calcium, birth weight, refractive error, urinary albumin-to-creatinine ratio