ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs12690
chr7:129831121
C
>
T
Sequence
cggctcccccttctcaaagggctt[C/T]ctcccactcatcccatccctaaca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NRF1_HUMAN
ARI1B_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NRF1_HUMAN
2.83
-3.70
2.7·10
-6
1.00
1.50
n/a
No Hit
ARI1B_HUMAN
2.14
-2.76
0.02
1.00
1.50
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
,
diabetic retinopathy in type 2 diabetes mellitus
,
ldl cholesterol change with statins
,
obesity with early age of onset (age >2)
,
serum creatinine
,
total cholesterol change with statins
GTEx eQTL
Cells_Cultured_fibroblasts
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)