rs12698354 chr7:155952040 G>A
- Sequence
aggggccgtgtgagcttccaactc[G/A]acccacagctctgccaggagaggc
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma) HT29 (colon adenocarcinoma)
- ASB for transcription factors
- JUN_HUMAN PPARG_HUMAN GCR_HUMAN EP300_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.68 | 1.19 | 2.05 | n/a | No Hit | |||
| PPARG_HUMAN | -0.84 | 1.84 | 2.50 | n/a | No Hit | |||
| GCR_HUMAN | -0.39 | 1.02 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | -0.17 | 0.95 | 1.89 | n/a | n/a |
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