rs12701758 chr7:39733396 G>A
- Sequence
acgtcacgagacccccgctatctc[G/A]ttggtggctatttcctctcccgct
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) A549 (lung carcinoma)
- ASB for transcription factors
- CREB1_HUMAN ATF2_HUMAN BMI1_HUMAN CREM_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 0.53 | 1.27 | 2.11 | n/a | No Hit | |||
| ATF2_HUMAN | -0.31 | 2.55 | 1.56 | n/a | No Hit | |||
| BMI1_HUMAN | -1.20 | 1.95 | 1.42 | n/a | n/a | |||
| CREM_HUMAN | -0.45 | 2.08 | 1.39 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP fasting insulin, homa-ir, ldl cholesterol, microalbuminuria, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Brain_Caudate_basal_ganglia, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Minor_Salivary_Gland, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Whole_Blood