rs12718597 chr7:50360730 C>A
- Sequence
cgctgcagacactctgacgactgc[C/A]gagctccgcagccccatgtcgtcc
- ASB in cell types
- K562 (myelogenous leukemia) Th1-cells
- ASB for transcription factors
- TF65_HUMAN MYB_HUMAN ATF4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | -2.59 | 2.08 | 1.50 | n/a | No Hit | |||
| MYB_HUMAN | 1.82 | -1.67 | 2.00 | n/a | No Hit | |||
| ATF4_HUMAN | n/a | 0.74 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, ldl cholesterol, mean corpuscular volume (mcv), red blood cell count (rbc), serum creatinine
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Uterus, Vagina, Whole_Blood