rs12731145 chr1:4008086 A>G
- Sequence
gaataccacgaggtggggtcactg[A/G]gcatcaccttggaggctggccacc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- ATF3_HUMAN ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | 2.24 | n/a | 1.33 | n/a | No Hit | |||
| ATF2_HUMAN | 2.03 | -1.99 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (geographic atrophy), fasting blood glucose, ldl cholesterol, total cholesterol