rs12761981 chr10:101142363 T>C
- Sequence
cgtgattcagcagccacccagaag[T/C]gggagctggacctgggacttggtc
- ASB in cell types
- A549 (lung carcinoma) T47D (invasive ductal carcinoma) skeletal muscles and myoblasts
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.24 | 0.48 | 1.56 | -0.43 | Weak Concordant | |||
| RAD21_HUMAN | 1.75 | 0.01 | 1.86 | n/a | n/a | |||
| SMC3_HUMAN | 1.11 | 0.02 | 1.92 | n/a | n/a |
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Motif analysis
