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rs1277028 chr1:108751345 C>T

Sequence
aaaaaccaaatattttttattgta[C/T]cacagtaactgttattatttatac
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) 2.40 -3.45 6.6·10-31.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP college completion
GTEx eQTL Brain_Spinal_cord_cervical_c-1 Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Whole_Blood

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