rs12772559 chr10:69424600 G>C
- Sequence
tggcagagcctggggaggtctcag[G/C]gctcttatgtgaaaaagaaaaagg
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.30 | 0.50 | 1.33 |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease, childhood acute lymphoblastic leukemia, hdl cholesterol, lp-pla2 mass, total cholesterol, waist height ratio squared
GTEx eQTL Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Minor_Salivary_Gland, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Vagina, Whole_Blood