rs12782847 chr10:70550109 G>T
- Sequence
cactgaagagcagagggactgaga[G/T]gagacaccctctagttcaggggct
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte lymphoblastoid cells
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 0.94 | -0.27 | 2.00 | n/a | n/a | |||
| RAD21_HUMAN | 0.84 | -0.03 | 1.84 | n/a | n/a | |||
| CTCF_HUMAN | 0.87 | 0.44 | 1.47 | n/a | No Hit |
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