rs12797 chr17:74770854 G>A
- Sequence
gccaactctactttgtaagccata[G/A]ggtgccaggtagcccggccaccct
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) SH-SY5Y (neuroblastoma) SUM159PT (pleiomorphic breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN REST_HUMAN CTBP1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.93 | 0.63 | 1.39 | n/a | No Hit | |||
| REST_HUMAN | n/a | 2.26 | 2.00 | n/a | No Hit | |||
| CTBP1_HUMAN | -1.84 | 2.18 | 2.00 | n/a | n/a |
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