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rs12942 chr20:46089326 G>A

Sequence
tgcggtcaggggccgcgagacggt[G/A]gcgggggacagcgctcagtacacc
ASB in cell types
CD14+ monocytes breast tumor tissue
ASB for transcription factors
STAT1_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.21 n/a 3.5·10-31.00 2.50 n/a No Hit
ESR1_HUMAN 2.10 n/a 9.4·10-31.00 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Spleen

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