ADASTRA v1.6.10
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rs12942
chr20:46089326
G
>
A
Sequence
tgcggtcaggggccgcgagacggt[G/A]gcgggggacagcgctcagtacacc
ASB in cell types
CD14+ monocytes
breast tumor tissue
ASB for transcription factors
STAT1_HUMAN
ESR1_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.21
n/a
3.5·10
-3
1.00
2.50
n/a
No Hit
ESR1_HUMAN
2.10
n/a
9.4·10
-3
1.00
2.50
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Spleen
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)