rs12983409 chr19:48255928 G>A
- Sequence
tcgcagaggaggtgggctttctga[G/A]aactgagggaagtaagctctcagg
- ASB in cell types
- liver lymphoblastoid cells
- ASB for transcription factors
- CTCF_HUMAN TYY1_HUMAN GABPA_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.97 | -0.12 | 1.33 | n/a | No Hit | |||
| TYY1_HUMAN | 1.59 | 0.17 | 1.33 | n/a | No Hit | |||
| GABPA_HUMAN | 1.61 | -1.86 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood