rs13009294 chr2:112795101 T>A
- Sequence
gtgacctccggcaattcccacatg[T/A]ctctgggctttccttatctatgaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN LMBL2_HUMAN ZN592_HUMAN RING2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.85 | 2.22 | 2.00 | n/a | No Hit | |||
| LMBL2_HUMAN | n/a | 2.79 | 2.00 | n/a | n/a | |||
| ZN592_HUMAN | n/a | 2.67 | 2.00 | n/a | n/a | |||
| RING2_HUMAN | -1.10 | 2.23 | 2.00 | n/a | n/a | |||
| MGAP_HUMAN | n/a | 2.43 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, fasting blood glucose, obesity with early age of onset (age >2), serum creatinine
GTEx eQTL Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid