rs13021 chr14:39181720 A>G
- Sequence
agtcacaaatcttcaaaaggtggt[A/G]gtagtagagatacaaaaggatcaa
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.39 | -0.92 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP allergic rhinitis, atopy, college completion, lp-pla2 mass, premature ovarian failure, rheumatoid arthritis, years of education
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Skin_Sun_Exposed_Lower_leg, Testis