ADASTRA v1.6.10
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rs130347
chr22:42680803
T
>
C
Sequence
cacagccaggaatcatgactgcac[T/C]gagtcatcacccacagaattgtca
ASB in cell types
HEK293 (embryonic kidney)
LHSAR (prostate epithelial cells)
ASB for transcription factors
ANDR_HUMAN
INSM2_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
1.03
-0.51
6.3·10
-3
1.00
1.33
n/a
No Hit
INSM2_HUMAN
2.36
-3.62
0.03
1.00
2.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
height
GTEx eQTL
Adipose_Visceral_Omentum
,
Brain_Amygdala
,
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)