rs130619 chr22:37040308 T>C
- Sequence
agtaaggaaatgtattaaagatac[T/C]gggaacaaactgtttccctattgg
- ASB in cell types
- VCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| VCaP (prostate carcinoma) | 1.21 | -0.17 | 1.88 |
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Motif analysis
No data available
Genetic associations
GRASP college completion, hematocrit (hct), hemoglobin (hb), ldl cholesterol, mean corpuscular hemoglobin concentration (mchc), mean corpuscular volume (mcv), microalbuminuria, urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid