rs13063024 chr3:111859198 C>T
- Sequence
ttcgctgtctggtgaggaaatcat[C/T]accctaggacgtaaaccctcccgc
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte HEK293 (embryonic kidney) HEK293T (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN JUN_HUMAN CREB1_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.17 | 2.41 | 1.56 | n/a | No Hit | |||
| JUN_HUMAN | -0.15 | 1.13 | 2.06 | n/a | No Hit | |||
| CREB1_HUMAN | 1.43 | -1.16 | 1.33 | n/a | No Hit | |||
| SMC3_HUMAN | -0.38 | 0.92 | 2.10 | n/a | n/a | |||
| GCR_HUMAN | -0.29 | 1.27 | 2.25 | n/a | No Hit |
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