rs13090 chr19:868115 C>T
- Sequence
cccccggccgtcacggacggtcct[C/T]tggatgcagatggtccagggatct
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.74 | -0.16 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, age at menarche, hdl cholesterol, ldl cholesterol, partial epilepsy, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Skin_Sun_Exposed_Lower_leg, Spleen, Whole_Blood