rs13099750 chr3:85360938 T>A
- Sequence
catccttcacatgctagttctcat[T/A]ccttgcctttgctcatgctgccac
- ASB in cell types
- T47D (invasive ductal carcinoma) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.57 | 1.45 | 1.36 | n/a | No Hit | |||
| RAD21_HUMAN | 1.03 | -1.09 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Nucleus_accumbens_basal_ganglia, Lung, Nerve_Tibial