ADASTRA v1.6.10
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rs13161205
chr5:170225980
C
>
T
Sequence
atgaaacattatttgtcaaagtct[C/T]caacagtgcagatccctaagattt
ASB in cell types
foreskin keratinocyte
MCF7 (Invasive ductal breast carcinoma)
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
0.62
n/a
3.2·10
-6
1.00
2.50
MCF7 (Invasive ductal breast carcinoma)
-0.68
0.85
1.00
3.9·10
-4
2.80
Items per page:
5
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Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
infant head circumference
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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