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rs131808 chr22:50524928 G>C

Sequence
acctacccccggagctcagactct[G/C]cccgccggctgtgtttaacctctc
ASB in cell types
HEK293 (embryonic kidney) GM12878 (female B-cells)
ASB for transcription factors
ZIC2_HUMAN KLF8_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZIC2_HUMAN 2.92 n/a 5.4·10-51.00 2.00 n/a n/a
KLF8_HUMAN 2.13 n/a 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI red cell distribution width
Finemapping multiple sclerosis
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Tibial Brain_Cerebellum Brain_Cortex Breast_Mammary_Tissue Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Muscle_Skeletal Nerve_Tibial Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Testis Thyroid Whole_Blood

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