rs13236250 chr7:39949428 C>T
- Sequence
ctcaagcaacagcagtgggcggca[C/T]acgaatcctctcctttctttaacc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- GABPA_HUMAN NRF1_HUMAN FOXK2_HUMAN RFOX2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 2.29 | -3.02 | 1.75 | n/a | No Hit | |||
| NRF1_HUMAN | 2.22 | n/a | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.30 | -1.10 | 2.00 | n/a | n/a | |||
| RFOX2_HUMAN | 2.52 | n/a | 2.00 | n/a | n/a | |||
| EGR1_HUMAN | 2.15 | -2.40 | 2.00 | -0.53 | Weak Concordant |
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Motif analysis
