ADASTRA v1.6.10
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rs13242357
chr7:158696348
G
>
A
Sequence
tgaaggccacttcctcaatattcc[G/A]tccgtcaaagcaggcacaagccca
ASB in cell types
foreskin keratinocyte
monocyte-derived dendritic cells
HEK293 (embryonic kidney)
coronary artery
Search SNPs nearby
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View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
-1.75
2.43
1.00
4.0·10
-6
2.00
monocyte-derived dendritic cells
n/a
1.15
1.00
5.5·10
-3
2.50
HEK293 (embryonic kidney)
-0.22
0.81
0.99
0.02
1.97
coronary artery
1.51
-1.42
0.05
1.00
1.00
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP
hip bone mineral density (bmd)
,
spine bone mineral density (bmd)
GTEx eQTL
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Heart_Left_Ventricle
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Spleen
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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