rs132479 chr22:44777180 C>T
- Sequence
caacaggcatactctaccacctcc[C/T]gctgggcccaggccttccccttgg
- ASB in cell types
- transverse colon
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.28 | 1.58 | 1.22 | 2.73 | Concordant |
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Motif analysis
