rs1327566 chr10:29300080 A>C
- Sequence
ttccaataaggctttatttacaga[A/C]acaggaggttttcctgtgggacat
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.55 | 1.72 | 1.67 | -0.73 | Weak Discordant |
Items per page:
1 – 1 of 1
Motif analysis
