rs1329622 chr9:77150995 G>C
- Sequence
ctgcaaggaatggacagctgtgta[G/C]agggagttggatcaggtttgtgcc
- ASB in cell types
- LNCaP (prostate carcinoma) PC9 (lung adenocarcinoma) foreskin keratinocyte
- ASB for transcription factors
- FOXA1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.23 | 1.93 | 1.79 | n/a | No Hit | |||
| CTCF_HUMAN | 0.60 | 1.01 | 1.37 | n/a | No Hit |
Items per page:
1 – 2 of 2